Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gm12957-201ENSMUST00000117835 377 ntBASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gm29705-201ENSMUST00000212598 474 ntBASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm14350-201ENSMUST00000116642 640 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm12742-201ENSMUST00000117326 410 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm43818-201ENSMUST00000200605 466 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm9899-201ENSMUST00000065519 555 ntBASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clcf1Q9QZM3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm16177-201ENSMUST00000120728 718 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms