Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm15371-201ENSMUST00000117057 784 ntBASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Gm11918-201ENSMUST00000121660 179 ntBASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61a2Q9JLR1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Gm45841-201ENSMUST00000207700 164 ntBASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sec61a2Q9JLR1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm28911-201ENSMUST00000188837 117 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms