Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.36□□□□□ -0.75
Smco4Q9JIS3 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gm7222-201ENSMUST00000117512 906 ntBASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco4Q9JIS3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.35□□□□□ -0.75
Smco4Q9JIS3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms