Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gm38002-201ENSMUST00000193255 180 ntBASIC14.66□□□□□ -0.06
Smco2Q9DA21 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.65□□□□□ -0.06
Smco2Q9DA21 Mir686-201ENSMUST00000102174 109 ntBASIC14.65□□□□□ -0.06
Smco2Q9DA21 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.65□□□□□ -0.06
Smco2Q9DA21 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.65□□□□□ -0.06
Smco2Q9DA21 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.65□□□□□ -0.06
Smco2Q9DA21 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.65□□□□□ -0.06
Smco2Q9DA21 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smco2Q9DA21 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Mir1247-201ENSMUST00000116706 82 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm25261-201ENSMUST00000157416 134 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm25927-201ENSMUST00000175058 117 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm9823-201ENSMUST00000051212 327 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Olfr582-201ENSMUST00000098212 960 ntBASIC14.64□□□□□ -0.07
Smco2Q9DA21 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smco2Q9DA21 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms