Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gm27306-201ENSMUST00000183970 107 ntBASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp5Q9D7S9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm9797-201ENSMUST00000052902 613 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm20445-201ENSMUST00000061905 565 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm26315-201ENSMUST00000083890 321 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp5Q9D7S9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chmp5Q9D7S9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms