Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim42Q9D2H5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm12428-201ENSMUST00000119844 727 ntBASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Mir1895-201ENSMUST00000122615 79 ntBASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm27494-201ENSMUST00000184735 189 ntBASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm10766-202ENSMUST00000194123 606 ntBASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim42Q9D2H5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim42Q9D2H5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Gm29541-201ENSMUST00000191351 678 ntBASIC13.02□□□□□ -0.33
Trim42Q9D2H5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Gm9229-201ENSMUST00000222777 126 ntBASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms