Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm42550-201ENSMUST00000201553 960 ntBASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm26315-201ENSMUST00000083890 321 ntBASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snf8Q9CZ28 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Gm20445-201ENSMUST00000061905 565 ntBASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snf8Q9CZ28 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snf8Q9CZ28 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms