Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm25144-201ENSMUST00000179561 110 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm25352-201ENSMUST00000179815 110 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm27772-201ENSMUST00000184900 187 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm7774-201ENSMUST00000200064 533 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm17330-201ENSMUST00000221047 165 ntBASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Gm18905-201ENSMUST00000205454 928 ntBASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trim13Q9CYB0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm25948-201ENSMUST00000175334 112 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm3436-201ENSMUST00000179930 840 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm43371-201ENSMUST00000202838 1031 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms