Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm14999-201ENSMUST00000121039 624 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm24845-201ENSMUST00000158034 109 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm29615-201ENSMUST00000185371 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28224-201ENSMUST00000186078 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm29001-201ENSMUST00000186177 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28292-201ENSMUST00000186593 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28101-201ENSMUST00000187608 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm29076-201ENSMUST00000187689 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28302-201ENSMUST00000187931 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28646-201ENSMUST00000188220 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28205-201ENSMUST00000189177 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm29032-201ENSMUST00000189797 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm28695-201ENSMUST00000190300 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm37448-201ENSMUST00000192795 697 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Ntng1-201ENSMUST00000051253 327 ntBASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cldnd1Q9CQX5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm14832-201ENSMUST00000121289 322 ntBASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm37666-201ENSMUST00000194110 866 ntBASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cldnd1Q9CQX5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms