Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 AC154806.5-202ENSMUST00000227217 1443 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Mir1192-201ENSMUST00000116976 121 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm11980-201ENSMUST00000121445 986 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm13487-201ENSMUST00000122240 864 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm25843-201ENSMUST00000122582 314 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm6152-201ENSMUST00000151704 340 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Mir7221-201ENSMUST00000184009 72 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm42464-201ENSMUST00000196717 417 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm18473-201ENSMUST00000220543 868 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm7441-201ENSMUST00000220697 1074 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 AC151904.4-201ENSMUST00000219868 1319 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gm15937-201ENSMUST00000120727 1235 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gm7287-201ENSMUST00000205267 602 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 AC168059.2-201ENSMUST00000224473 333 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Gm42995-201ENSMUST00000197047 1330 ntBASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg3Q9CQV4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg3Q9CQV4 Gm13612-201ENSMUST00000119276 390 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms