Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm8000-201ENSMUST00000188378 592 ntBASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TpbpbQ9CQC0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
TpbpbQ9CQC0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
TpbpbQ9CQC0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm25948-201ENSMUST00000175334 112 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm27533-201ENSMUST00000183800 152 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TpbpbQ9CQC0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.57□□□□□ -0.56
TpbpbQ9CQC0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms