Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm23596-201ENSMUST00000104304 132 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm6630-201ENSMUST00000119199 454 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm18059-201ENSMUST00000208073 580 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm18201-201ENSMUST00000174735 875 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Gm45527-201ENSMUST00000211052 774 ntBASIC12.86□□□□□ -0.35
Cdh23Q99PF4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Grk6-205ENSMUST00000224653 2976 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm21092-201ENSMUST00000178995 955 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm13315-201ENSMUST00000120376 991 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Mir7677-201ENSMUST00000184226 67 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm45500-201ENSMUST00000211676 803 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh23Q99PF4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms