Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Gm6621-201ENSMUST00000193251 772 ntBASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b1Q99NB9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b1Q99NB9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b1Q99NB9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b1Q99NB9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b1Q99NB9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b1Q99NB9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b1Q99NB9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b1Q99NB9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm14381-201ENSMUST00000122105 414 ntBASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm26083-201ENSMUST00000157904 193 ntBASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm32025-201ENSMUST00000217960 307 ntBASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm24526-201ENSMUST00000082921 158 ntBASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b1Q99NB9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms