Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm11618-201ENSMUST00000117946 267 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm8213-201ENSMUST00000118191 441 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm12490-201ENSMUST00000120255 560 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm15806-201ENSMUST00000120696 955 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm6244-201ENSMUST00000178732 841 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm27892-201ENSMUST00000185017 106 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln4Q99NB8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln4Q99NB8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms