Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.54□□□□□ -0.4
Rab28Q99KL7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.54□□□□□ -0.4
Rab28Q99KL7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab28Q99KL7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.53□□□□□ -0.4
Rab28Q99KL7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.53□□□□□ -0.4
Rab28Q99KL7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.53□□□□□ -0.4
Rab28Q99KL7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.53□□□□□ -0.4
Rab28Q99KL7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.53□□□□□ -0.4
Rab28Q99KL7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab28Q99KL7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.52□□□□□ -0.4
Rab28Q99KL7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.52□□□□□ -0.4
Rab28Q99KL7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab28Q99KL7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms