Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm13813-201ENSMUST00000120998 787 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm43438-201ENSMUST00000198133 379 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Daam2-202ENSMUST00000224595 1926 ntBASIC11.85□□□□□ -0.51
Lims1Q99JW4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lims1Q99JW4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm5687-201ENSMUST00000118252 640 ntBASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.84□□□□□ -0.51
Lims1Q99JW4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lims1Q99JW4 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.83□□□□□ -0.51
Lims1Q99JW4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lims1Q99JW4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.83□□□□□ -0.52
Lims1Q99JW4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms