Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm16202-201ENSMUST00000117532 544 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm7561-201ENSMUST00000211203 886 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm6091-201ENSMUST00000098307 165 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Gm11618-201ENSMUST00000117946 267 ntBASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Gm8810-201ENSMUST00000172895 754 ntBASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha3Q91Y16 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Gm14350-201ENSMUST00000116642 640 ntBASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Gm22331-201ENSMUST00000158066 136 ntBASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Gm19931-201ENSMUST00000198920 368 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms