Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm15653-201ENSMUST00000119247 907 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm5970-201ENSMUST00000131638 1216 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm5866-201ENSMUST00000177881 973 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm27631-201ENSMUST00000184163 466 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm43066-201ENSMUST00000199589 1260 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm7775-201ENSMUST00000218871 853 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Daam2-202ENSMUST00000224595 1926 ntBASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb3Q91XZ7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm23757-201ENSMUST00000158353 100 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm38018-201ENSMUST00000195651 540 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb3Q91XZ7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms