Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Gm45668-201ENSMUST00000211271 493 ntBASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhga3Q91XY5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Gm45841-201ENSMUST00000207700 164 ntBASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhga3Q91XY5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm13689-201ENSMUST00000119360 685 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm29608-201ENSMUST00000190444 463 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm18018-201ENSMUST00000198273 408 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm6983-201ENSMUST00000214912 628 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Gm26315-201ENSMUST00000083890 321 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms