Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm8215-201ENSMUST00000120627 990 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm11918-201ENSMUST00000121660 179 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm12138-201ENSMUST00000122180 951 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm9023-201ENSMUST00000198408 1038 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Gm5471-201ENSMUST00000072732 337 ntBASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb17Q91VD8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm16149-201ENSMUST00000117631 309 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm14854-201ENSMUST00000117758 841 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Cfhr3-201ENSMUST00000170441 1022 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 AU022133-201ENSMUST00000200601 873 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb17Q91VD8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb17Q91VD8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.92□□□□□ -0.18
Pcdhb17Q91VD8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb17Q91VD8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb17Q91VD8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms