Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.85□□□□□ -0.19
TraipQ8VIG6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TraipQ8VIG6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gm14381-201ENSMUST00000122105 414 ntBASIC13.84□□□□□ -0.19
TraipQ8VIG6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gm4857-201ENSMUST00000192718 785 ntBASIC13.84□□□□□ -0.19
TraipQ8VIG6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.84□□□□□ -0.19
TraipQ8VIG6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TraipQ8VIG6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TraipQ8VIG6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.83□□□□□ -0.19
TraipQ8VIG6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.83□□□□□ -0.19
TraipQ8VIG6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TraipQ8VIG6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TraipQ8VIG6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms