Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps39Q8R5L3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.02□□□□□ -0.33
Vps39Q8R5L3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Auts2-212ENSMUST00000178555 309 ntBASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Gm27437-201ENSMUST00000183429 107 ntBASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vps39Q8R5L3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gm7488-201ENSMUST00000117148 684 ntBASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gm12859-201ENSMUST00000117834 427 ntBASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gm10576-201ENSMUST00000191927 825 ntBASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms