Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Gm2260-201ENSMUST00000184965 657 ntBASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 AA914427-201ENSMUST00000193194 1166 ntBASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Gm18212-201ENSMUST00000211678 889 ntBASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp7Q8R1T1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Gm14130-201ENSMUST00000118417 987 ntBASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Gm44405-201ENSMUST00000198952 126 ntBASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp7Q8R1T1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gm13665-201ENSMUST00000120830 528 ntBASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp7Q8R1T1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms