Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Gm16479-201ENSMUST00000121706 932 ntBASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Gm43818-201ENSMUST00000200605 466 ntBASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sf3a1Q8K4Z5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Mir686-201ENSMUST00000102174 109 ntBASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sf3a1Q8K4Z5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Gm11425-201ENSMUST00000119608 498 ntBASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Gm11637-201ENSMUST00000120601 592 ntBASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Gm9396-201ENSMUST00000076703 567 ntBASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms