Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.27□□□□□ -0.44
Clrn1Q8K445 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn1Q8K445 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gm11618-201ENSMUST00000117946 267 ntBASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gm11803-201ENSMUST00000119966 444 ntBASIC12.27□□□□□ -0.45
Clrn1Q8K445 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gm8810-201ENSMUST00000172895 754 ntBASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.27□□□□□ -0.45
Clrn1Q8K445 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.27□□□□□ -0.45
Clrn1Q8K445 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn1Q8K445 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm8213-201ENSMUST00000118191 441 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm8652-201ENSMUST00000181363 964 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm5035-201ENSMUST00000215581 927 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.26□□□□□ -0.45
Clrn1Q8K445 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn1Q8K445 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm11814-201ENSMUST00000119515 929 ntBASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm11978-201ENSMUST00000122315 466 ntBASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms