Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cchcr1Q8K2I2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Mir686-201ENSMUST00000102174 109 ntBASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cchcr1Q8K2I2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm6458-201ENSMUST00000211573 635 ntBASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.35■□□□□ 0.05
Cchcr1Q8K2I2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms