Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Gm11803-201ENSMUST00000119966 444 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfwd3Q8CIK8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Gm8602-201ENSMUST00000184045 607 ntBASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Gm27839-201ENSMUST00000184242 106 ntBASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Gm7561-201ENSMUST00000211203 886 ntBASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfwd3Q8CIK8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms