Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.05■□□□□ 0.16
Smc5Q8CG46 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Gm12291-201ENSMUST00000121627 311 ntBASIC16.05■□□□□ 0.16
Smc5Q8CG46 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.05■□□□□ 0.16
Smc5Q8CG46 Gm20949-201ENSMUST00000206478 952 ntBASIC16.05■□□□□ 0.16
Smc5Q8CG46 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Gm5867-201ENSMUST00000063197 592 ntBASIC16.05■□□□□ 0.16
Smc5Q8CG46 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc5Q8CG46 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Gm6218-201ENSMUST00000219812 628 ntBASIC16.04■□□□□ 0.16
Smc5Q8CG46 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc5Q8CG46 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.03■□□□□ 0.16
Smc5Q8CG46 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Gm7104-201ENSMUST00000179741 2532 ntBASIC16.03■□□□□ 0.16
Smc5Q8CG46 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Gm16202-201ENSMUST00000117532 544 ntBASIC16.03■□□□□ 0.16
Smc5Q8CG46 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Mir7654-201ENSMUST00000185082 70 ntBASIC16.03■□□□□ 0.16
Smc5Q8CG46 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.03■□□□□ 0.16
Smc5Q8CG46 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Gm19220-201ENSMUST00000222682 803 ntBASIC16.03■□□□□ 0.16
Smc5Q8CG46 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms