Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm3436-201ENSMUST00000179930 840 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Map1b-203ENSMUST00000223725 2669 ntBASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gm4995-201ENSMUST00000117247 432 ntBASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc28bQ8CEG5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gm8000-201ENSMUST00000188378 592 ntBASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gm7774-201ENSMUST00000200064 533 ntBASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms