Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lrif1Q8CDD9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Gm13385-201ENSMUST00000121089 220 ntBASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Gm9522-201ENSMUST00000182394 926 ntBASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lrif1Q8CDD9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lrif1Q8CDD9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lrif1Q8CDD9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lrif1Q8CDD9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lrif1Q8CDD9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lrif1Q8CDD9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lrif1Q8CDD9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lrif1Q8CDD9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms