Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Gm14660-201ENSMUST00000119809 575 ntBASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Gm27731-201ENSMUST00000185192 107 ntBASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Gm25857-201ENSMUST00000082788 129 ntBASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc60Q8C4J0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gm12363-201ENSMUST00000122250 668 ntBASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gm37042-201ENSMUST00000193816 581 ntBASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gm10268-201ENSMUST00000085340 555 ntBASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc60Q8C4J0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm17208-201ENSMUST00000168388 535 ntBASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm45784-201ENSMUST00000188360 142 ntBASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc60Q8C4J0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms