Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cps1Q8C196 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Gm8194-201ENSMUST00000159783 859 ntBASIC17.13■□□□□ 0.33
Cps1Q8C196 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 AC132901.1-201ENSMUST00000224345 508 ntBASIC17.13■□□□□ 0.33
Cps1Q8C196 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC17.13■□□□□ 0.33
Cps1Q8C196 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.13■□□□□ 0.33
Cps1Q8C196 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cps1Q8C196 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cps1Q8C196 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cps1Q8C196 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cps1Q8C196 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC17.12■□□□□ 0.33
Cps1Q8C196 Gm14665-201ENSMUST00000122294 557 ntBASIC17.12■□□□□ 0.33
Cps1Q8C196 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC17.12■□□□□ 0.33
Cps1Q8C196 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.12■□□□□ 0.33
Cps1Q8C196 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC17.12■□□□□ 0.33
Cps1Q8C196 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cps1Q8C196 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cps1Q8C196 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm15595-201ENSMUST00000120840 961 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm15881-201ENSMUST00000148792 942 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC17.11■□□□□ 0.33
Cps1Q8C196 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cps1Q8C196 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cps1Q8C196 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cps1Q8C196 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cps1Q8C196 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.11■□□□□ 0.33
Cps1Q8C196 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cps1Q8C196 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.11■□□□□ 0.33
Cps1Q8C196 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC17.11■□□□□ 0.33
Cps1Q8C196 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm23085-201ENSMUST00000157849 293 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 Mir7677-201ENSMUST00000184226 67 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm19287-201ENSMUST00000203190 358 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 Gm45550-201ENSMUST00000209380 946 ntBASIC17.11■□□□□ 0.33
Cps1Q8C196 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms