Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm11803-201ENSMUST00000119966 444 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Gm8810-201ENSMUST00000172895 754 ntBASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf3Q8C120 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gm8652-201ENSMUST00000181363 964 ntBASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gm5356-201ENSMUST00000093326 615 ntBASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms