Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Gm25116-201ENSMUST00000157191 122 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Mir7085-201ENSMUST00000184353 66 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Thoc7-209ENSMUST00000225325 765 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Gm9396-201ENSMUST00000076703 567 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.58□□□□□ -0.56
Ube3dQ8BX13 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ube3dQ8BX13 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm12390-201ENSMUST00000117897 397 ntBASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm8652-201ENSMUST00000181363 964 ntBASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.57□□□□□ -0.56
Ube3dQ8BX13 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms