Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm22018-201ENSMUST00000104357 131 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm13392-201ENSMUST00000117708 150 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm37008-201ENSMUST00000195712 319 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm8099-201ENSMUST00000200510 742 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup54Q8BTS4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm16379-201ENSMUST00000161469 348 ntBASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm8762-201ENSMUST00000193486 339 ntBASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm43630-201ENSMUST00000201550 776 ntBASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm19309-201ENSMUST00000218295 205 ntBASIC13.28□□□□□ -0.28
Nup54Q8BTS4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms