Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm44891-201ENSMUST00000208817 2223 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm43916-201ENSMUST00000205062 967 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm45219-201ENSMUST00000205602 465 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Gm15432-201ENSMUST00000121106 195 ntBASIC18.12■□□□□ 0.49
Usp54Q8BL06 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Gm28071-201ENSMUST00000190355 478 ntBASIC18.12■□□□□ 0.49
Usp54Q8BL06 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Usp54Q8BL06 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm24231-201ENSMUST00000104315 133 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm15131-201ENSMUST00000119124 595 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm18304-201ENSMUST00000189162 546 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm5455-201ENSMUST00000058710 715 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Retreg1-206ENSMUST00000228306 1430 ntBASIC18.11■□□□□ 0.49
Usp54Q8BL06 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp54Q8BL06 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gm8199-201ENSMUST00000121323 823 ntBASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gm8365-201ENSMUST00000197334 648 ntBASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 AC135469.1-201ENSMUST00000225984 772 ntBASIC18.1■□□□□ 0.49
Usp54Q8BL06 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms