Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nop53Q8BK35 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.98□□□□□ -0.17
Nop53Q8BK35 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nop53Q8BK35 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Gm12490-201ENSMUST00000120255 560 ntBASIC13.97□□□□□ -0.17
Nop53Q8BK35 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC13.97□□□□□ -0.17
Nop53Q8BK35 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Gm19078-201ENSMUST00000206311 727 ntBASIC13.97□□□□□ -0.17
Nop53Q8BK35 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.97□□□□□ -0.17
Nop53Q8BK35 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Gm14928-201ENSMUST00000120198 477 ntBASIC13.96□□□□□ -0.17
Nop53Q8BK35 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Gm26464-201ENSMUST00000157094 305 ntBASIC13.96□□□□□ -0.17
Nop53Q8BK35 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Gm29608-201ENSMUST00000190444 463 ntBASIC13.96□□□□□ -0.17
Nop53Q8BK35 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nop53Q8BK35 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nop53Q8BK35 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nop53Q8BK35 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nop53Q8BK35 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nop53Q8BK35 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nop53Q8BK35 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Gm15376-201ENSMUST00000122258 783 ntBASIC13.95□□□□□ -0.18
Nop53Q8BK35 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Gm28760-201ENSMUST00000185995 736 ntBASIC13.95□□□□□ -0.18
Nop53Q8BK35 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.95□□□□□ -0.18
Nop53Q8BK35 Gm45668-201ENSMUST00000211271 493 ntBASIC13.95□□□□□ -0.18
Nop53Q8BK35 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nop53Q8BK35 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms