Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2bQ8BJF9 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chmp2bQ8BJF9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2bQ8BJF9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms