Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Mir686-201ENSMUST00000102174 109 ntBASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Gm37497-201ENSMUST00000195830 798 ntBASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Gm6091-201ENSMUST00000098307 165 ntBASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atg4bQ8BGE6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Gm24644-201ENSMUST00000157114 139 ntBASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Gm27331-201ENSMUST00000183705 60 ntBASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms