Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm15920-201ENSMUST00000118998 402 ntBASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krr1Q8BGA5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Krr1Q8BGA5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Krr1Q8BGA5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Krr1Q8BGA5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.33□□□□□ -0.43
Krr1Q8BGA5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krr1Q8BGA5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Gm21854-201ENSMUST00000179901 471 ntBASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Gm29667-201ENSMUST00000190817 490 ntBASIC12.32□□□□□ -0.44
Krr1Q8BGA5 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krr1Q8BGA5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms