Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.85□□□□□ -0.35
Ubp1Q811S7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.85□□□□□ -0.35
Ubp1Q811S7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.85□□□□□ -0.35
Ubp1Q811S7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubp1Q811S7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ubp1Q811S7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm6458-201ENSMUST00000211573 635 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm5186-201ENSMUST00000218781 920 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms