Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm12165-201ENSMUST00000117047 342 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm8194-201ENSMUST00000159783 859 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm10076-201ENSMUST00000073238 384 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.53□□□□□ -0.08
Trnp1Q80ZI1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trnp1Q80ZI1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trnp1Q80ZI1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.52□□□□□ -0.08
Trnp1Q80ZI1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trnp1Q80ZI1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trnp1Q80ZI1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Gm13315-201ENSMUST00000120376 991 ntBASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.52□□□□□ -0.09
Trnp1Q80ZI1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm13035-201ENSMUST00000117496 342 ntBASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm12314-201ENSMUST00000118104 538 ntBASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Gm9230-201ENSMUST00000188228 532 ntBASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trnp1Q80ZI1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trnp1Q80ZI1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms