Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm6621-201ENSMUST00000193251 772 ntBASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm37466-201ENSMUST00000195692 652 ntBASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.07□□□□□ -0.48
Pif1Q80SX8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm24255-201ENSMUST00000104481 128 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm4986-201ENSMUST00000119731 549 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm16570-201ENSMUST00000161951 436 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Mospd4-201ENSMUST00000180618 576 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm4768-201ENSMUST00000206199 686 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.06□□□□□ -0.48
Pif1Q80SX8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.06□□□□□ -0.48
Pif1Q80SX8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.05□□□□□ -0.48
Pif1Q80SX8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.05□□□□□ -0.48
Pif1Q80SX8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Gm7046-201ENSMUST00000221351 977 ntBASIC12.05□□□□□ -0.48
Pif1Q80SX8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pif1Q80SX8 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.05□□□□□ -0.48
Pif1Q80SX8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms