Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.09□□□□□ -0.31
Rad54bQ6PFE3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.08□□□□□ -0.31
Rad54bQ6PFE3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rad54bQ6PFE3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm18307-201ENSMUST00000206864 949 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rad54bQ6PFE3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Mir7654-201ENSMUST00000185082 70 ntBASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Gm28631-201ENSMUST00000190740 334 ntBASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Gm20949-201ENSMUST00000206478 952 ntBASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rad54bQ6PFE3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms