Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Nup98Q6PFD9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Nup98Q6PFD9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.05■□□□□ -0
Nup98Q6PFD9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.05■□□□□ -0
Nup98Q6PFD9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.05■□□□□ -0
Nup98Q6PFD9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.05■□□□□ -0
Nup98Q6PFD9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Gm9022-201ENSMUST00000182482 992 ntBASIC15.05■□□□□ -0
Nup98Q6PFD9 Gm18753-201ENSMUST00000201000 566 ntBASIC15.05■□□□□ -0
Nup98Q6PFD9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nup98Q6PFD9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.05■□□□□ -0
Nup98Q6PFD9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.05■□□□□ -0
Nup98Q6PFD9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nup98Q6PFD9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Nup98Q6PFD9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nup98Q6PFD9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Nup98Q6PFD9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nup98Q6PFD9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.04■□□□□ -0
Nup98Q6PFD9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.04■□□□□ -0
Nup98Q6PFD9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm19187-201ENSMUST00000206781 892 ntBASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.04■□□□□ -0
Nup98Q6PFD9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.04■□□□□ -0
Nup98Q6PFD9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.04■□□□□ -0
Nup98Q6PFD9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nup98Q6PFD9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.04■□□□□ -0
Nup98Q6PFD9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm43962-201ENSMUST00000203898 190 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.03■□□□□ -0
Nup98Q6PFD9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nup98Q6PFD9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.03■□□□□ -0
Nup98Q6PFD9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm43947-201ENSMUST00000203019 959 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm17812-201ENSMUST00000204935 318 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Nup98Q6PFD9 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.03■□□□□ -0
Nup98Q6PFD9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup98Q6PFD9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms