Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Gm27631-201ENSMUST00000184163 466 ntBASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Gm44771-201ENSMUST00000206975 626 ntBASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 AW822252-206ENSMUST00000208904 237 ntBASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Mir125a-201ENSMUST00000083545 68 ntBASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm27525-201ENSMUST00000184465 107 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf220Q6PDX6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm13365-201ENSMUST00000121188 973 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm9719-201ENSMUST00000162765 543 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Mir6990-201ENSMUST00000183724 91 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms