Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Proscos-202ENSMUST00000178990 666 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm24196-201ENSMUST00000179161 110 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm29649-201ENSMUST00000185649 419 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm9396-201ENSMUST00000076703 567 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.17■□□□□ 0.02
Smarcc2Q6PDG5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm24644-201ENSMUST00000157114 139 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm22331-201ENSMUST00000158066 136 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms