Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.53□□□□□ -0.4
Sdc3Q64519 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm10146-201ENSMUST00000072739 309 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm16372-201ENSMUST00000073088 450 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.52□□□□□ -0.4
Sdc3Q64519 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Sdc3Q64519 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.52□□□□□ -0.4
Sdc3Q64519 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc3Q64519 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm37922-201ENSMUST00000195596 455 ntBASIC12.52□□□□□ -0.41
Sdc3Q64519 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.52□□□□□ -0.41
Sdc3Q64519 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.52□□□□□ -0.41
Sdc3Q64519 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sdc3Q64519 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc3Q64519 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms