Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.69□□□□□ -0.38
Vsx2Q61412 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm14127-201ENSMUST00000117906 678 ntBASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm15824-201ENSMUST00000119516 955 ntBASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.68□□□□□ -0.38
Vsx2Q61412 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.68□□□□□ -0.38
Vsx2Q61412 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.68□□□□□ -0.38
Vsx2Q61412 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.68□□□□□ -0.38
Vsx2Q61412 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx2Q61412 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm5687-201ENSMUST00000118252 640 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm11814-201ENSMUST00000119515 929 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.67□□□□□ -0.38
Vsx2Q61412 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx2Q61412 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vsx2Q61412 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms