Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cln3Q61124 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cln3Q61124 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm8018-201ENSMUST00000173536 789 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cln3Q61124 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.2□□□□□ -0.14
Cln3Q61124 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cln3Q61124 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cln3Q61124 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.19□□□□□ -0.14
Cln3Q61124 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.19□□□□□ -0.14
Cln3Q61124 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.19□□□□□ -0.14
Cln3Q61124 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Gm8385-201ENSMUST00000058999 643 ntBASIC14.19□□□□□ -0.14
Cln3Q61124 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.19□□□□□ -0.14
Cln3Q61124 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cln3Q61124 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cln3Q61124 Gm13996-201ENSMUST00000118456 430 ntBASIC14.18□□□□□ -0.14
Cln3Q61124 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.18□□□□□ -0.14
Cln3Q61124 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.18□□□□□ -0.14
Cln3Q61124 Gm7003-201ENSMUST00000195089 312 ntBASIC14.18□□□□□ -0.14
Cln3Q61124 Gzmn-202ENSMUST00000225535 989 ntBASIC14.18□□□□□ -0.14
Cln3Q61124 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cln3Q61124 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cln3Q61124 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.18□□□□□ -0.14
Cln3Q61124 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cln3Q61124 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.18□□□□□ -0.14
Cln3Q61124 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms